Goodness of fit test - overview
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Goodness of fit test | Paired sample $t$ test | Logistic regression |
You cannot compare more than 3 methods |
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Independent variable | Independent variable | Independent variables | |
None | 2 paired groups | One or more quantitative of interval or ratio level and/or one or more categorical with independent groups, transformed into code variables | |
Dependent variable | Dependent variable | Dependent variable | |
One categorical with $J$ independent groups ($J \geqslant 2$) | One quantitative of interval or ratio level | One categorical with 2 independent groups | |
Null hypothesis | Null hypothesis | Null hypothesis | |
| H0: $\mu = \mu_0$
Here $\mu$ is the population mean of the difference scores, and $\mu_0$ is the population mean of the difference scores according to the null hypothesis, which is usually 0. A difference score is the difference between the first score of a pair and the second score of a pair. | Model chi-squared test for the complete regression model:
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Alternative hypothesis | Alternative hypothesis | Alternative hypothesis | |
| H1 two sided: $\mu \neq \mu_0$ H1 right sided: $\mu > \mu_0$ H1 left sided: $\mu < \mu_0$ | Model chi-squared test for the complete regression model:
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Assumptions | Assumptions | Assumptions | |
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Test statistic | Test statistic | Test statistic | |
$X^2 = \sum{\frac{(\mbox{observed cell count} - \mbox{expected cell count})^2}{\mbox{expected cell count}}}$
Here the expected cell count for one cell = $N \times \pi_j$, the observed cell count is the observed sample count in that same cell, and the sum is over all $J$ cells. | $t = \dfrac{\bar{y} - \mu_0}{s / \sqrt{N}}$
Here $\bar{y}$ is the sample mean of the difference scores, $\mu_0$ is the population mean of the difference scores according to the null hypothesis, $s$ is the sample standard deviation of the difference scores, and $N$ is the sample size (number of difference scores). The denominator $s / \sqrt{N}$ is the standard error of the sampling distribution of $\bar{y}$. The $t$ value indicates how many standard errors $\bar{y}$ is removed from $\mu_0$. | Model chi-squared test for the complete regression model:
The wald statistic can be defined in two ways:
Likelihood ratio chi-squared test for individual $\beta_k$:
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Sampling distribution of $X^2$ if H0 were true | Sampling distribution of $t$ if H0 were true | Sampling distribution of $X^2$ and of the Wald statistic if H0 were true | |
Approximately the chi-squared distribution with $J - 1$ degrees of freedom | $t$ distribution with $N - 1$ degrees of freedom | Sampling distribution of $X^2$, as computed in the model chi-squared test for the complete model:
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Significant? | Significant? | Significant? | |
| Two sided:
| For the model chi-squared test for the complete regression model and likelihood ratio chi-squared test for individual $\beta_k$:
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n.a. | $C\%$ confidence interval for $\mu$ | Wald-type approximate $C\%$ confidence interval for $\beta_k$ | |
- | $\bar{y} \pm t^* \times \dfrac{s}{\sqrt{N}}$
where the critical value $t^*$ is the value under the $t_{N-1}$ distribution with the area $C / 100$ between $-t^*$ and $t^*$ (e.g. $t^*$ = 2.086 for a 95% confidence interval when df = 20). The confidence interval for $\mu$ can also be used as significance test. | $b_k \pm z^* \times SE_{b_k}$ where the critical value $z^*$ is the value under the normal curve with the area $C / 100$ between $-z^*$ and $z^*$ (e.g. $z^*$ = 1.96 for a 95% confidence interval). | |
n.a. | Effect size | Goodness of fit measure $R^2_L$ | |
- | Cohen's $d$: Standardized difference between the sample mean of the difference scores and $\mu_0$: $$d = \frac{\bar{y} - \mu_0}{s}$$ Cohen's $d$ indicates how many standard deviations $s$ the sample mean of the difference scores $\bar{y}$ is removed from $\mu_0.$ | $R^2_L = \dfrac{D_{null} - D_K}{D_{null}}$ There are several other goodness of fit measures in logistic regression. In logistic regression, there is no single agreed upon measure of goodness of fit. | |
n.a. | Visual representation | n.a. | |
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n.a. | Equivalent to | n.a. | |
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Example context | Example context | Example context | |
Is the proportion of people with a low, moderate, and high social economic status in the population different from $\pi_{low} = 0.2,$ $\pi_{moderate} = 0.6,$ and $\pi_{high} = 0.2$? | Is the average difference between the mental health scores before and after an intervention different from $\mu_0 = 0$? | Can body mass index, stress level, and gender predict whether people get diagnosed with diabetes? | |
SPSS | SPSS | SPSS | |
Analyze > Nonparametric Tests > Legacy Dialogs > Chi-square...
| Analyze > Compare Means > Paired-Samples T Test...
| Analyze > Regression > Binary Logistic...
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Jamovi | Jamovi | Jamovi | |
Frequencies > N Outcomes - $\chi^2$ Goodness of fit
| T-Tests > Paired Samples T-Test
| Regression > 2 Outcomes - Binomial
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Practice questions | Practice questions | Practice questions | |